I was having this same issue with a bunch of react-hooks/exhaustive-deps lint warnings ended up using the json formatter and a script to insert the eslint disable comment. I ran yarn lint . -f json -o warnings.json to get the json list of lints and then this

const json = require('./warnings.json');

const fs = require('fs');



json.forEach(({ filePath, messages, source }) => {

  // if there is no source we have nothing that needs to be eslint-ignore'd

  if (!source) {

    return;

  }



  const data = source.split('n');



  // if the source has multiple lines which need to be eslint-ignored our offset changes per addition

  // offset is 1 because line numbers start at 1 but index numbers in an array start at 0

  let offset = 1;



  // group errors/warnings by line because we want to have one eslint disable comment with all the rules to disable

  const groupedMessages = messages.reduce((acc, next) => {

    const prevMessages = acc[next.line] ? acc[next.line] : [];

    // some lines may have the same rule twice

    const duplicateRuleForLine = prevMessages.find(message => message.ruleId === next.ruleId);

    // ignore jsx and graphql lint rules

    const applicableRule = next.ruleId && !next.ruleId.includes('jsx') && !next.ruleId.includes('graphql');



    // ignore the eslint-ignore addition for duplicates and non applicable rules

    if (duplicateRuleForLine || !applicableRule) {

      return acc;

    }



    return {

      ...acc,

      [next.line]: [...prevMessages, next],

    };

  }, {});



  Object.entries(groupedMessages).forEach(([line, messages]) => {

    // grouped ignores

    const ignore = `// eslint-disable-next-line ${messages.map(({ ruleId }) => ruleId).join(' ')}`;

    data.splice(line - offset, 0, ignore);

    offset--;

  });



  const updated = data.join('n');



  fs.writeFile(filePath, updated, function(err) {

    if (err) return console.log(err);

  });

});

Worked out well for me, although I wish these comments I inserted were auto-formatted.